diff --git a/pyproject.toml b/pyproject.toml
index 7892033e3..c334b38ad 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -37,11 +37,12 @@ extend-immutable-calls = ["fastapi.Depends", "fastapi.security.HTTPBasic"]
 [tool.pytest.ini_options]
 base_url = "http://127.0.0.1:7860"
 
-# M04: Focus coverage on main app; omit extensions and external repos.
+# M04: Focus coverage on core modules; omit extensions, repos, scripts.
 [tool.coverage.run]
 omit = [
     "extensions-builtin/*",
     "repositories/*",
+    "scripts/*",
     "*/__pycache__/*",
     "config*.py",
 ]