diff --git a/modules/lang/agda/packages.el b/modules/lang/agda/packages.el
index d90e9c856..5ee15e678 100644
--- a/modules/lang/agda/packages.el
+++ b/modules/lang/agda/packages.el
@@ -6,11 +6,11 @@
     :recipe (:host github :repo "agda/agda"
              :files ("src/data/emacs-mode/agda-input.el")
              :nonrecursive t)
-    :pin "5cf984c3d200d973e5a74eb758f0638591e50666")
+    :pin "6310545817ba96775e0942ee66806a505a246141")
 
   (package! agda2-mode
     :recipe (:host github :repo "agda/agda"
              :files ("src/data/emacs-mode/*.el"
                      (:exclude "agda-input.el"))
              :nonrecursive t)
-    :pin "5cf984c3d200d973e5a74eb758f0638591e50666"))
+    :pin "6310545817ba96775e0942ee66806a505a246141"))
diff --git a/modules/lang/clojure/packages.el b/modules/lang/clojure/packages.el
index 07880df75..7cad1aef8 100644
--- a/modules/lang/clojure/packages.el
+++ b/modules/lang/clojure/packages.el
@@ -14,13 +14,13 @@
 (package! parseedn :pin "3407e4530a367b6c2b857dae261cdbb67a440aaa")
 
 ;;; Core packages
-(package! clojure-mode :pin "bddba12e969c456236e2b6a1881017a6cafe64b4")
+(package! clojure-mode :pin "f44ea50308b1afe913b75dfc18e6280e52fd21b4")
 (when (and (modulep! +tree-sitter)
            (treesit-available-p)
            (> emacs-major-version 29))  ; requires 30+
-  (package! clojure-ts-mode :pin "96fdffcbe9e1b8ebf9ad14e23b06f62cc3422e22"))
+  (package! clojure-ts-mode :pin "f47fefb5d7d6fed24314ae317acf4d0fb96dccd6"))
 (package! clj-refactor :pin "362cb46bf808dc42d2aaf022afe93048439680c4")
-(package! cider :pin "ae247d88455c79d6c039d9c322347c77ab3ad11b")
+(package! cider :pin "75dc57aebed59212952595684b9aae60f95c94a6")
 (when (modulep! :checkers syntax -flymake)
   (package! flycheck-clj-kondo :pin "e38c67ba9db1ea1cbe1b61ab39b506c05efdcdbf"))
 (package! jet :pin "c9a92675efd802f37df5e3eab7858dbbeced6ea4")
diff --git a/modules/lang/coq/packages.el b/modules/lang/coq/packages.el
index aef616a13..7eb516188 100644
--- a/modules/lang/coq/packages.el
+++ b/modules/lang/coq/packages.el
@@ -5,4 +5,4 @@
   :pin "75c13f91b6eb40b8855dfe8ac55f8f7dac876caa"
   ;; REVIEW: Remove when ProofGeneral/PG#771 is fixed. Also see #8169.
   :recipe (:build (:not autoloads)))
-(package! company-coq :pin "78ed04ce39e925232a556d2077718cc7b215469c")
+(package! company-coq :pin "1fc1d8f2d56e460b33c6d41a659488dce7b214f9")
diff --git a/modules/lang/dart/packages.el b/modules/lang/dart/packages.el
index 438a54f30..762a52778 100644
--- a/modules/lang/dart/packages.el
+++ b/modules/lang/dart/packages.el
@@ -7,11 +7,11 @@
   (package! dart-ts-mode
     :recipe (:host github
              :repo "50ways2sayhard/dart-ts-mode")
-    :pin "ab87873f25f7e0cc8d22daa2501aae141dbe98ad"))
+    :pin "0e42336bf7d74546dfadf4060d918e2d81952e03"))
 
 (when (and (modulep! +lsp)
            (modulep! :tools lsp -eglot))
-  (package! lsp-dart :pin "fd8239518026041a07305e88c15ad40faf3c3038"))
+  (package! lsp-dart :pin "166e4f2ba12403da5691d352b587c88d24ddb574"))
 
 (when (modulep! +flutter)
   (package! flutter :pin "e71235d400787d977da7ed792709437899c2a03c")
diff --git a/modules/lang/erlang/packages.el b/modules/lang/erlang/packages.el
index 9cbfb263b..5a4e55d6a 100644
--- a/modules/lang/erlang/packages.el
+++ b/modules/lang/erlang/packages.el
@@ -1,7 +1,7 @@
 ;; -*- no-byte-compile: t; -*-
 ;;; lang/erlang/packages.el
 
-(package! erlang :pin "f80e9c1c4a3f271e39fcdb0be4ddbd88da3118c7")
+(package! erlang :pin "ea2bfd02bed1f003cd73c0eaa5d87dde153e9124")
 
 (when (and (modulep! +tree-sitter) (treesit-available-p))
   (package! erlang-ts :pin "959907d26d32f7d23bdcbb6f9d06ccb2a5db54c3"))
diff --git a/modules/lang/ess/packages.el b/modules/lang/ess/packages.el
index 35a7a1d54..3bed33295 100644
--- a/modules/lang/ess/packages.el
+++ b/modules/lang/ess/packages.el
@@ -3,7 +3,7 @@
 
 (package! ess :pin "bfe892db15e94387f70319efdc55710dc3660d2f")
 (package! ess-view-data :pin "7dcbd23d4cef2030753d16e1ca1811d3466484e7")
-(package! polymode :pin "14b1fd8d2a183f11b123f62e02801dc1139da9c1")
+(package! polymode :pin "4604f55cc020c75562526fb76b723e5e242c97c0")
 (package! poly-R :pin "fee0b6e99943fa49ca5ba8ae1a97cbed5ed51946")
 (package! quarto-mode :pin "a7b974f7d22ef939eaed8b9919434bcf20b1438f")
 
diff --git a/modules/lang/graphql/packages.el b/modules/lang/graphql/packages.el
index 1d513bf62..4a3c528a9 100644
--- a/modules/lang/graphql/packages.el
+++ b/modules/lang/graphql/packages.el
@@ -1,7 +1,7 @@
 ;; -*- no-byte-compile: t; -*-
 ;;; lang/graphql/packages.el
 
-(package! graphql-mode :pin "ef757c6ce226ebabc834d49db5161ec90cf82202")
+(package! graphql-mode :pin "d7f105a4bfcffa54bdc6a6f3d6eb740c561355c2")
 (package! graphql-doc :pin "17755a2466a1acef68eac664093fcd13cd51494a")
 (unless (modulep! +lsp)
   (package! company-graphql
diff --git a/modules/lang/julia/packages.el b/modules/lang/julia/packages.el
index 6a83420db..749d15c41 100644
--- a/modules/lang/julia/packages.el
+++ b/modules/lang/julia/packages.el
@@ -1,7 +1,7 @@
 ;; -*- no-byte-compile: t; -*-
 ;;; lang/julia/packages.el
 
-(package! julia-mode :pin "aadf29523a120c666939cd7adac4b7dece5bd6ef")
+(package! julia-mode :pin "1478898ea0ab1ae21ec053fcc81c6b42136a2224")
 (package! julia-repl :pin "0173237a43d9a42f0d69a5405283fabe1ac602a0")
 
 (when (and (modulep! +tree-sitter) (treesit-available-p))
diff --git a/modules/lang/kotlin/packages.el b/modules/lang/kotlin/packages.el
index f57fd8d1b..846662566 100644
--- a/modules/lang/kotlin/packages.el
+++ b/modules/lang/kotlin/packages.el
@@ -4,7 +4,7 @@
 (package! kotlin-mode :pin "fddd747e5b4736e8b27a147960f369b86179ddff")
 
 (when (and (modulep! +tree-sitter) (treesit-available-p))
-  (package! kotlin-ts-mode :pin "051c9ef534956c235343fb41546623ff87a1695b"))
+  (package! kotlin-ts-mode :pin "b318a64a7f6b35fa5abf93b8e86cc42305fa7552"))
 
 (when (modulep! :checkers syntax -flymake)
   (package! flycheck-kotlin :pin "a2a6abb9a7f85c6fb15ce327459ec3c8ff780188"))
diff --git a/modules/lang/latex/packages.el b/modules/lang/latex/packages.el
index 8ae38156f..33d558b7b 100644
--- a/modules/lang/latex/packages.el
+++ b/modules/lang/latex/packages.el
@@ -4,7 +4,7 @@
 (package! auctex
   :recipe (:files ("*.el" "*.info" "dir"
                    "doc" "etc" "images" "latex" "style"))
-  :pin "1939acb54bb90a1b358eb479aa949af150ac06ec")
+  :pin "f0c4b1dcc9e5987dce43b1e43f530351157ff577")
 (package! adaptive-wrap :pin "d75665b9c88e65f91dadd1e5880905bbdb7c09b7")
 (package! auctex-cont-latexmk :pin "88c5f04d841c212d2b8331153e9e5c2767cb7197")
 (when (modulep! :editor evil +everywhere)
diff --git a/modules/lang/lean/packages.el b/modules/lang/lean/packages.el
index d37377d01..91f0fcd86 100644
--- a/modules/lang/lean/packages.el
+++ b/modules/lang/lean/packages.el
@@ -4,7 +4,7 @@
 (when (modulep! +v3)
   (package! lean-mode :pin "99d6a34dc5b12f6e996e9217fa9f6fe4a6af037a"))
 
-(package! nael :pin "3ee1cf286dc1ee3c9f99357079288ce1285c10c0")
+(package! nael :pin "fbfb6757365cbde89d7ae0b56727315db15d31e4")
 (when (and (modulep! +lsp)
            (modulep! :tools lsp -eglot))
   (package! nael-lsp
@@ -12,4 +12,4 @@
     ;;   unlikely `nael' will be loaded at that point.
     ;; REVIEW: Address this upstream!
     :recipe (:build (:not autoloads))
-    :pin "3ee1cf286dc1ee3c9f99357079288ce1285c10c0"))
+    :pin "fbfb6757365cbde89d7ae0b56727315db15d31e4"))
diff --git a/modules/lang/markdown/config.el b/modules/lang/markdown/config.el
index ab0067c97..1dbb6d8fd 100644
--- a/modules/lang/markdown/config.el
+++ b/modules/lang/markdown/config.el
@@ -140,10 +140,10 @@ capture, the end position, and the output buffer.")
   :init
   (set-tree-sitter! 'markdown-mode 'markdown-ts-mode
     `((markdown :url "https://github.com/tree-sitter-grammars/tree-sitter-markdown"
-                :rev ,(if (< (treesit-library-abi-version) 15) "v0.4.1" "v0.5.1")
+                :rev ,(if (< (treesit-library-abi-version) 15) "v0.4.1" "v0.5.3")
                 :source-dir "tree-sitter-markdown/src")
       (markdown-inline :url "https://github.com/tree-sitter-grammars/tree-sitter-markdown"
-                       :rev ,(if (< (treesit-library-abi-version) 15) "v0.4.1" "v0.5.1")
+                       :rev ,(if (< (treesit-library-abi-version) 15) "v0.4.1" "v0.5.3")
                        :source-dir "tree-sitter-markdown-inline/src"))))
 
 
diff --git a/modules/lang/markdown/packages.el b/modules/lang/markdown/packages.el
index c2b8c2ac9..149d75bf5 100644
--- a/modules/lang/markdown/packages.el
+++ b/modules/lang/markdown/packages.el
@@ -1,7 +1,7 @@
 ;; -*- no-byte-compile: t; -*-
 ;;; lang/markdown/packages.el
 
-(package! markdown-mode :pin "9de2df5a9f2f864c82ec112d3369154767a2bb49")
+(package! markdown-mode :pin "f8d1be7cd5dfd64c0e4f88c29a3f84408cde0b47")
 (package! markdown-toc :pin "d22633b654193bcab322ec51b6dd3bb98dd5f69f")
 
 ;; Required by `markdown-mode', or it will install it via package.el if it isn't
diff --git a/modules/lang/nix/packages.el b/modules/lang/nix/packages.el
index e609d21f2..7723e0919 100644
--- a/modules/lang/nix/packages.el
+++ b/modules/lang/nix/packages.el
@@ -3,13 +3,13 @@
 
 (package! nix-mode :pin "719feb7868fb567ecfe5578f6119892c771ac5e5")
 (package! nix-update :pin "d67f4f7ba8c8ec43144600f5f970c5fd958fc2f7")
-(package! nixos-options :pin "053a2d5110ce05b7f99bcc2ac4804b70cbe87916")
+(package! nixos-options :pin "e241b58c9e6e24b9c2bdc708631db21a3ed2fe4b")
 
 (when (and (modulep! +tree-sitter) (treesit-available-p))
-  (package! nix-ts-mode :pin "625306cf9cd99390aa032563f44157ee25ad66d5"))
+  (package! nix-ts-mode :pin "319831712125e8c9e4f14b66def518d7a633685c"))
 
 (when (modulep! :completion company)
-  (package! company-nixos-options :pin "053a2d5110ce05b7f99bcc2ac4804b70cbe87916"))
+  (package! company-nixos-options :pin "e241b58c9e6e24b9c2bdc708631db21a3ed2fe4b"))
 
 (when (modulep! :completion helm)
-  (package! helm-nixos-options :pin "053a2d5110ce05b7f99bcc2ac4804b70cbe87916"))
+  (package! helm-nixos-options :pin "e241b58c9e6e24b9c2bdc708631db21a3ed2fe4b"))
diff --git a/modules/lang/ocaml/packages.el b/modules/lang/ocaml/packages.el
index 8b401f2a1..0c2cee865 100644
--- a/modules/lang/ocaml/packages.el
+++ b/modules/lang/ocaml/packages.el
@@ -6,12 +6,12 @@
 (package! ocp-indent :pin "e2ac9daae2579151ad258b40071e5074a4b1c3fa")
 (package! dune
   :recipe (:host github :repo "ocaml/dune" :files ("editor-integration/emacs/*.el"))
-  :pin "7a7d49206f20ffe0879a4d88de62c721221835cf")
+  :pin "141393af4047a9d4547503cac69db5397411eb89")
 
 (unless (modulep! +lsp)
-  (package! merlin :pin "1c4148af05d7576702252a98ca99ba6de0659be3")
+  (package! merlin :pin "fad4a2785c6d860b392b977eb79f73040174eb30")
   (package! merlin-eldoc :pin "bf8edc63d85b35e4def352fa7ce4ea39f43e1fd8")
-  (package! merlin-company :pin "1c4148af05d7576702252a98ca99ba6de0659be3")
+  (package! merlin-company :pin "fad4a2785c6d860b392b977eb79f73040174eb30")
   (when (modulep! :checkers syntax -flymake)
     (package! flycheck-ocaml :pin "77f8ddbd9bfc3a11957ac7ec7e45d5fa9179b192")))
 
diff --git a/modules/lang/org/packages.el b/modules/lang/org/packages.el
index b51ce6f35..debf2ab68 100644
--- a/modules/lang/org/packages.el
+++ b/modules/lang/org/packages.el
@@ -80,7 +80,7 @@
   (package! gnuplot :pin "4c6b18f71ff7604e2640033207f5a882ddce78af")
   (package! gnuplot-mode :pin "601f6392986f0cba332c87678d31ae0d0a496ce7"))
 (when (modulep! +jupyter)
-  (package! jupyter :pin "de89cbeca890db51ba84aee956658f89aaa0b642"))
+  (package! jupyter :pin "242fdc709ce0faa3b9ee81dcc48cfd791898e6b8"))
 (when (modulep! +journal)
   (package! org-journal :pin "831ecfd50a29057c239b9fa55ebc02d402a6d4a7"))
 (when (modulep! +noter)
@@ -102,7 +102,7 @@
     :pin "0753c057773ed3e3ec68a558e9af38d8fce728b8"))
 (when (or (modulep! +roam)
           (modulep! +roam2))
-  (package! org-roam :pin "b4857fd7a140361883dfb95e1193ee42698a4afb"))
+  (package! org-roam :pin "7cd906b6f8b18a21766228f074aff24586770934"))
 
 ;;; Babel
 (package! ob-async :pin "9aac486073f5c356ada20e716571be33a350a982")
diff --git a/modules/lang/rust/packages.el b/modules/lang/rust/packages.el
index b83f38000..64265a4b6 100644
--- a/modules/lang/rust/packages.el
+++ b/modules/lang/rust/packages.el
@@ -1,5 +1,5 @@
 ;; -*- no-byte-compile: t; -*-
 ;;; lang/rust/packages.el
 
-(package! rust-mode :pin "f68ddca5c22b94a2de7c9ce20d629cd78d60b269")
-(package! rustic :pin "cb013cd217ceed76b2336ff244ea3cf715bc449d")
+(package! rust-mode :pin "668069ad8b6ca20bd0d2334db1c0d046809affd6")
+(package! rustic :pin "eea94386bf0c7b55adc264faefdfb134ae2807b9")
diff --git a/modules/lang/scala/packages.el b/modules/lang/scala/packages.el
index e7a4014c0..82f647943 100644
--- a/modules/lang/scala/packages.el
+++ b/modules/lang/scala/packages.el
@@ -1,7 +1,7 @@
 ;; -*- no-byte-compile: t; -*-
 ;;; lang/scala/packages.el
 
-(package! sbt-mode :pin "cc68728a6ef0600aad369157b3a2d0ce56afba9b")
+(package! sbt-mode :pin "c353df6aa112c05dde6dc63ccf813c2203cb472b")
 (package! scala-mode :pin "50bcafa181baec7054e27f4bca55d5f9277c6350")
 
 (when (and (modulep! +tree-sitter) (treesit-available-p))